PBxplore
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Protein Blocks
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PBassign
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A
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C
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G
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I
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L
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P
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R
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S
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W
A
assign() (in module pbxplore.assignment)
Atom (class in pbxplore.structure.structure)
AtomError
C
Chain (class in pbxplore.structure.structure)
ChainError
chains_from_files() (in module pbxplore.structure)
chains_from_trajectory() (in module pbxplore.structure)
compare() (in module pbxplore.analysis)
compute_freq_matrix() (in module pbxplore.analysis)
compute_neq() (in module pbxplore.analysis)
compute_score_by_position() (in module pbxplore.analysis)
count_matrix() (in module pbxplore.analysis)
G
generate_weblogo() (in module pbxplore.analysis)
get_phi_psi_angles() (pbxplore.structure.structure.Chain method)
I
InvalidBlockError
L
load_substitution_matrix() (in module pbxplore.PB)
P
pbxplore (module)
pbxplore.analysis (module)
pbxplore.assign() (in module pbxplore)
pbxplore.assignment (module)
pbxplore.chains_from_files() (in module pbxplore)
pbxplore.chains_from_trajectory() (in module pbxplore)
pbxplore.io (module)
pbxplore.PB (module)
pbxplore.structure (module)
PDB (class in pbxplore.structure.PDB)
plot_map() (in module pbxplore.analysis)
plot_neq() (in module pbxplore.analysis)
R
read_fasta() (in module pbxplore.io)
read_occurence_file() (in module pbxplore.analysis)
read_several_fasta() (in module pbxplore.io)
S
SizeError
substitution_score() (in module pbxplore.analysis)
W
write_count_matrix() (in module pbxplore.io)
write_fasta() (in module pbxplore.io)
write_fasta_entry() (in module pbxplore.io)
write_neq() (in module pbxplore.io)
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